RT Journal Article T1 Molecular Detection of Theileria equi, Babesia caballi, and Borrelia burgdorferi Sensu Lato in Hippobosca equina from Horses in Spain A1 Dorrego Rodríguez, Abel A1 Olvera-Maneu, Sergi A1 Jose-Cunilleras, Eduard A1 Gago, Paloma A1 Raez, Alejandra A1 Rivera Arroyo, Belén A1 Oporto, Ariana A1 González Domínguez, Sergio A1 Cruz López, Fátima AB The forest fly (Hippobosca equina) is an obligate haematophagous dipteran insect (order Diptera) that primarily infests horses and may contribute to the circulation of vector-borne pathogens. This study aimed to investigate the presence of Anaplasma phagocytophilum, Borrelia burgdorferi s.l., Babesia caballi, and Theileria equi, important vector-borne pathogens of equids, in forest flies collected from horses in endemic areas of Spain. A total of 170 forest flies were collected from 39 equids across four geographical regions in Spain (Segovia, Madrid, Toledo, and Menorca) and blood samples were collected from 27 of these horses. All flies were morphologically and molecularly identified as H. equina, and DNA extracted from flies and equine blood was screened using multiplex real-time and nested PCR, followed by sequencing and phylogenetic analysis. Neither flies nor horses tested positive for A. phagocytophilum, whereas one fly was positive for B. burgdorferi s.l. (0.6%). In contrast, T. equi and B. caballi DNA were detected in 11.2% and 1.2% of flies, respectively, and all positive flies were collected from horses positive for equine piroplasmosis (T. equi/B. caballi infection), with identical 18S rRNA sequences between hosts and flies. Nested PCR showed a higher detection rate than real-time PCR for the detection of these piroplasms in flies and blood samples. These findings provide the first molecular evidence of EP pathogens in H. equina and support further investigation into the epidemiological importance of forest flies in equine pathogen surveillance. PB MDPI YR 2026 FD 2026 LK https://hdl.handle.net/20.500.14352/131533 UL https://hdl.handle.net/20.500.14352/131533 LA eng NO Dorrego, A., Olvera-Maneu, S., Jose-Cunilleras, E., Gago, P., Raez, A., Rivera, B., Oporto, A., Gonzalez, S., & Cruz-Lopez, F. (2026). Molecular Detection of Theileria equi, Babesia caballi, and Borrelia burgdorferi Sensu Lato in Hippobosca equina from Horses in Spain. Pathogens (Basel, Switzerland), 15(1), 94. https://doi.org/10.3390/pathogens15010094 NO Author Contributions: Conceptualization, A.D. and F.C.-L.; methodology, A.D. and F.C.-L.; validation, A.D., F.C.-L., S.O.-M. and E.J.-C.; formal analysis, F.C.-L.; investigation, A.D., P.G., A.R., B.R. and A.O.; resources, S.O.-M. and F.C.-L.; data curation, A.D.; writing—original draft preparation, A.D. and F.C.-L.; writing—review and editing, A.D., F.C.-L., S.O.-M., E.J.-C. and S.G.; supervision, F.C.-L.; project administration, S.O.-M. and F.C.-L.; funding acquisition, S.O.-M. and F.C.-L. All authors have read and agreed to the published version of the manuscript NO Universidad Complutense de Madrid NO Institut Menorquí d’Estudis NO Banco Santander DS Docta Complutense RD 21 mar 2026