RT Journal Article T1 Synthesis and Biophysical and Biological Studies of N-Phenylbenzamide Derivatives Targeting Kinetoplastid Parasites A1 Nué-Martinez, J.J. A1 Cisneros, David A1 Moreno-Blázquez, María del Valle A1 Fonseca-Berzal, Cristina A1 Manzano, J.I A1 Kraeutler, D A1 Ungogo, M.A A1 Aloraini, M.A A1 Elati, H.A.A A1 Ibáñez Escribano, Alexandra A1 Lagartera, L A1 Herraiz, Tomás A1 Gamarro, Francisco A1 de Koning, Harry P A1 Gómez-Barrio, Alicia A1 Dardonville, Christophe AB The AT-rich mitochondrial DNA (kDNA) of trypanosomatid parasites is a target of DNA minor groove binders. We report the synthesis, antiprotozoal screening, and SAR studies of three series of analogues of the known antiprotozoal kDNA binder 2-((4-(4-((4,5-dihydro-1H-imidazol-3-ium-2-yl)amino)benzamido)phenyl)amino)-4,5-dihydro-1H-imidazol-3-ium (1a). Bis(2-aminoimidazolines) (1) and bis(2-aminobenzimidazoles) (2) showed micromolar range activity against Trypanosoma brucei, whereas bisarylimidamides (3) were submicromolar inhibitors of T. brucei, Trypanosoma cruzi, and Leishmania donovani. None of the compounds showed relevant activity against the urogenital, nonkinetoplastid parasite Trichomonas vaginalis. We show that series 1 and 3 bind strongly and selectively to the minor groove of AT DNA, whereas series 2 also binds by intercalation. The measured pKa indicated different ionization states at pH 7.4, which correlated with the DNA binding affinities (ΔTm) for series 2 and 3. Compound 3a, which was active and selective against the three parasites and displayed adequate metabolic stability, is a fine candidate for in vivo studies. PB ACS Publications YR 2023 FD 2023-09-20 LK https://hdl.handle.net/20.500.14352/104177 UL https://hdl.handle.net/20.500.14352/104177 LA eng NO Agencia Estatal de Investigación NO European Regional Development Fund NO Recovery and Resilience Facility, RRF, NextGenerationEU NO Petroleum Technology Development Fund DS Docta Complutense RD 12 abr 2025