A standard protocol for reporting species distribution models

dc.contributor.authorZurell, Damaris
dc.contributor.authorFranklin, Janet
dc.contributor.authorKönig, Christian
dc.contributor.authorBouchet, Phil
dc.contributor.authorDormann, Carsten
dc.contributor.authorElith, Jane
dc.contributor.authorFandos Guzmán, Guillermo
dc.contributor.authorFeng, Xiao
dc.contributor.authorGuillera-Arroita, Gurutzeta
dc.contributor.authorGuisan, Antoine
dc.contributor.authorLahoz-Monfort, José
dc.contributor.authorLeitão, Pedro
dc.contributor.authorPark, Daniel
dc.contributor.authorPeterson, Townsend
dc.contributor.authorRapacciuolo, Giovanni
dc.contributor.authorSchmatz, Dirk
dc.contributor.authorSchröder, Boris
dc.contributor.authorSerra-Diaz, Josep
dc.contributor.authorThuiller, Wilfried
dc.contributor.authorYates, Katherine
dc.contributor.authorZimmermann, Niklaus
dc.contributor.authorMerow, Cory
dc.date.accessioned2024-01-29T17:39:22Z
dc.date.available2024-01-29T17:39:22Z
dc.date.issued2020
dc.descriptionDZ, CK and GF acknowledge support from the German Science Foundation (DFG, grant no. ZU 361-1/1). BS acknowledges support by the German Science Foundation (grant no. SCHR1000/6-2) and by the Volkswagenstiftung and Niedersächsisches Ministerium für Wissenschaft und Kultur (METAPOLIS, ZN3121). BS and PJL acknowledge support by the joint BiodivERsA-project GreenFutureForest (grant no. 01LC1610A). WT was supported by the GAMBAS project funded by the French National Research Agency (ANR-18-CE02-0025). PB was partly funded by OPNAV N45 and the SURTASS LFA Settlement Agreement, being managed by the U.S. Navy's Living Marine Resources program under Contract no. N39430-17-C-1982. CM acknowledges funding from National Science Foundation grant DBI 1565046 and DBI 1661510. JF acknowledges the support of the National Science Foundation (USA) grant no 1853697. GGA and JE acknowledge support of the Australian Research Council via grant DP180101852.
dc.description.abstractSpecies distribution models (SDMs) constitute the most common class of models across ecology, evolution and conservation. The advent of ready-to-use software packages and increasing availability of digital geoinformation have considerably assisted the application of SDMs in the past decade, greatly enabling their broader use for informing conservation and management, and for quantifying impacts from global change. However, models must be fit for purpose, with all important aspects of their development and applications properly considered. Despite the widespread use of SDMs, standardisation and documentation of modelling protocols remain limited, which makes it hard to assess whether development steps are appropriate for end use. To address these issues, we propose a standard protocol for reporting SDMs, with an emphasis on describing how a study's objective is achieved through a series of modeling decisions. We call this the ODMAP (Overview, Data, Model, Assessment and Prediction) protocol, as its components reflect the main steps involved in building SDMs and other empirically-based biodiversity models. The ODMAP protocol serves two main purposes. First, it provides a checklist for authors, detailing key steps for model building and analyses, and thus represents a quick guide and generic workflow for modern SDMs. Second, it introduces a structured format for documenting and communicating the models, ensuring transparency and reproducibility, facilitating peer review and expert evaluation of model quality, as well as meta-analyses. We detail all elements of ODMAP, and explain how it can be used for different model objectives and applications, and how it complements efforts to store associated metadata and define modelling standards. We illustrate its utility by revisiting nine previously published case studies, and provide an interactive web-based application to facilitate its use. We plan to advance ODMAP by encouraging its further refinement and adoption by the scientific community.
dc.description.departmentDepto. de Biodiversidad, Ecología y Evolución
dc.description.facultyFac. de Ciencias Biológicas
dc.description.refereedTRUE
dc.description.sponsorshipDeutsche Forschungsgemeinschaft
dc.description.sponsorshipBundesministerium für Forschung, Technologie und Raumfahrt (Deutschland)
dc.description.sponsorshipAgence Nationale de Recherche (France)
dc.description.sponsorshipNational Science Foundation (USA)
dc.description.sponsorshipAustralian Research Council
dc.description.statuspub
dc.identifier.citationZurell, Damaris, et al. «A Standard Protocol for Reporting Species Distribution Models». Ecography, vol. 43, n.o 9, septiembre de 2020, pp. 1261-77. https://doi.org/10.1111/ecog.04960.
dc.identifier.doi10.1111/ecog.04960
dc.identifier.essn1600-0587.
dc.identifier.issn0906-7590
dc.identifier.officialurlhttps://doi.org/10.1111/ecog.04960
dc.identifier.relatedurlhttp://www.ecography.org/appendix/ecog-04960
dc.identifier.urihttps://hdl.handle.net/20.500.14352/96234
dc.journal.titleEcography
dc.language.isoeng
dc.page.final1277
dc.page.initial1261
dc.publisherWiley
dc.rightsAttribution 4.0 Internationalen
dc.rights.accessRightsopen access
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subject.cdu574.9
dc.subject.keywordBiodiversity assessment
dc.subject.keywordEcological niche model
dc.subject.keywordHabitat suitability model
dc.subject.keywordReproducibility
dc.subject.keywordShiny
dc.subject.keywordTransparency
dc.subject.ucmEcología (Biología)
dc.subject.ucmMedio ambiente natural
dc.subject.unesco2505.01 Biogeografía
dc.titleA standard protocol for reporting species distribution models
dc.typejournal article
dc.type.hasVersionVoR
dc.volume.number43
dspace.entity.typePublication
relation.isAuthorOfPublication48eedd17-5277-44b0-8c76-090678ca6a42
relation.isAuthorOfPublication.latestForDiscovery48eedd17-5277-44b0-8c76-090678ca6a42

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