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Epidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods

dc.contributor.authorSmith, Peter
dc.contributor.authorLe Devendec, Laëtitia
dc.contributor.authorJouy, Eric
dc.contributor.authorLarvor, Emeline
dc.contributor.authorLe Breton, Alain
dc.contributor.authorPicón Camacho, Sara
dc.contributor.authorZrnčić, Snježana
dc.contributor.authorZupičić, Ivana Giovanna
dc.contributor.authorOraić, Dražen
dc.contributor.authorKarataş, Süheyla
dc.contributor.authorVerner-Jeffreys, David
dc.contributor.authorWokorac Joseph, Andrew
dc.contributor.authorLight, Edel
dc.contributor.authorVan Essen-Zandbergen, Alieda
dc.contributor.authorVan Gelderen, Betty
dc.contributor.authorVoorbergen-Laarman, Michal
dc.contributor.authorHaenen, Olga L. M.
dc.contributor.authorVela Alonso, Ana Isabel
dc.contributor.authorGarcía, María
dc.contributor.authorBaron, Sandrine
dc.date.accessioned2024-05-28T15:21:53Z
dc.date.available2024-05-28T15:21:53Z
dc.date.issued2023-08-31
dc.description.abstractThis work aims to generate the data needed to set epidemiological cut-off values for minimum inhibitory concentration (MIC) and disc-diffusion zone measurements of Vibrio anguillarum. A total of 261 unique isolates were tested, applying standard methods specifying incubation at 28°C for 24-28 h. Aggregated MIC distributions for a total of 247 isolates were determined in 9 laboratories for 11 agents. Data aggregations of the disc zone for the 10 agents analysed contained between 157 and 218 observations made by 4 to 7 laboratories. Acceptable ranges for quality control (QC) reference strains were available for 7 agents and the related multi-laboratory aggregated data were censored, excluding the data of a laboratory that failed to meet QC requirements. Statistical methods were applied to calculate epidemiological cut-off values. Cut-off values for MIC data were calculated for florfenicol (≤1 µg ml-1), gentamicin (≤4 µg ml-1), oxytetracycline (≤0.25 µg ml-1) and trimethoprim/sulfamethoxazole (≤0.125/2.38 µg ml-1). The cut-off values for disc zone data were calculated for enrofloxacin (≥29 mm), florfenicol (≥27 mm), gentamicin (≥19 mm), oxolinic acid (≥24 mm), oxytetracycline (≥24 mm) and trimethoprim/sulfamethoxazole (≥26 mm). MIC and disc-diffusion zone data for the other agents where not supported by QC, thus yielding only provisional cut-off values (meropenem, ceftazidime). Regardless of whether QC is available, some of the aggregated MIC distributions (enrofloxacin, oxolinic acid), disc zone (sulfamethoxazole), and MIC and disc-diffusion distributions (ampicillin, chloramphenicol) did not meet the statistical requirements. The data produced will be submitted to the Clinical Laboratory Standards Institute for their consideration in setting international consensus epidemiological cut-off values.
dc.description.departmentDepto. de Sanidad Animal
dc.description.facultyCentro de Vigilancia Sanitaria Veterinaria (VISAVET)
dc.description.facultyFac. de Veterinaria
dc.description.refereedTRUE
dc.description.sponsorshipEuropean Commission
dc.description.sponsorshipMinistère de l'Agriculture et de la Souveraineté alimentaire (France)
dc.description.sponsorshipMinistère de la Transition écologique et de la Cohésion des territoires (France)
dc.description.sponsorshipNorwegian Environmental Agency
dc.description.sponsorshipMinistero della Salute (Italia)
dc.description.statuspub
dc.identifier.citationSmith P, Le Devendec L, Jouy E, Larvor E et Al. (2023) Epidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods. Dis Aquat Org 155:109-123. https://doi.org/10.3354/dao03745
dc.identifier.doi10.3354/dao03745
dc.identifier.essn1616-1580
dc.identifier.issn0177-5103
dc.identifier.officialurlhttps://doi.org/10.3354/dao03745
dc.identifier.pmid37650482
dc.identifier.urihttps://hdl.handle.net/20.500.14352/104504
dc.journal.titleDiseases of Aquatic Organisms
dc.language.isoeng
dc.page.final123
dc.page.initial109
dc.publisherInter Research Science
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H2020/727315/EU
dc.relation.projectIDinfo:eu-repo/grantAgreement/EC/H2020/727610/EU
dc.relation.projectID17080031
dc.relation.projectID06/2020
dc.rightsAttribution 4.0 Internationalen
dc.rights.accessRightsopen access
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subject.cdu591.524
dc.subject.keywordCLSI VET04
dc.subject.keywordNormalized resistance interpretation
dc.subject.keywordECOFFinder
dc.subject.keywordAntimicrobial susceptibility
dc.subject.keywordAquatic animals
dc.subject.ucmVeterinaria
dc.subject.unesco3109 Ciencias Veterinarias
dc.titleEpidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods
dc.typejournal article
dc.type.hasVersionVoR
dc.volume.number155
dspace.entity.typePublication
relation.isAuthorOfPublication83481d48-83ea-472f-8b74-067bc00debee
relation.isAuthorOfPublication.latestForDiscovery83481d48-83ea-472f-8b74-067bc00debee

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Epidemiological cut-off values for Vibrio anguillarum MIC and disc diffusion data generated by standardised methods

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