Preliminary assessment of genetic diversity between Glebionis coronaria and G. discolor (Asteraceae) by AFLP markers
Loading...
Official URL
Full text at PDC
Publication date
2023
Advisors (or tutors)
Editors
Journal Title
Journal ISSN
Volume Title
Publisher
University of Ljubljana
Citations
Exportar
Citation
Gallucci, A., Musarella, C. M., Cano-Orti, A., Piñar Fuentes, J. C., Quinto Canas, R., & Villano, C. (2023). Preliminary assessment of genetic diversity between Glebionis coronaria and G. discolor (Asteraceae) by AFLP markers. Acta Agriculturae Slovenica, 119(1). https://doi.org/10.14720/AAS.2023.119.1.2787
Abstract
Glebionis coronaria is a valuable and medicinal herb native of Mediterranean region. Recently, G. coronaria var. discolor has been elevated to the rank of species as G. discolor (d'Urv.) Cano based on morphological characteristics, distinguishing it from G. coronaria var. coronaria (=G. coronaria). To investigate the genetic basis of this diversity, AFLP markers were applied to genotypes of G. discolor and G. coronaria sampled in three different Mediterranean regions (Italy, Spain, and Portugal). Our results showed that among 1347 fragments identified with five primer combinations 99.55 % were polymorphic. The genetic distance and the Shannon Index values suggested that the two species can be genetically distinguished, but further studies are needed to confirm this hypothesis
Glebionis coronaria je cenjeno zdravilno zelišče, samoniklo na območju Mediterana. V zadjem času je bila različica G. coronaria var. discolor dvignjena na rang vrste kot vrsta G. discolor(d’Urv.) Canona osnovi morfoloških last-nosti, po katerih se razlikuje od vrste G. coronaria var. coronaria(=G. coronaria). Za preučitev genetske osnove te raznolikosti so bili uporabljeni AFLP markerji za analizo genotipov vrst G. di-scolor in G. coronaria vzorčenih na različnih območjih Medite-rana (Italija, Španija in Portugalska). Rezultati so pokazali, da je bilo med 1347 fragmenti, identificiranih s kombinacijami petih primerjev 99,55 % polimorfnih. Genetska razdalja in vrednosti Shannonovega indeksa nakazujejo, da sta vrsti genetsko ločeni, a so potrebne nadaljne raziskave za potrditev te hipoteze.
Glebionis coronaria je cenjeno zdravilno zelišče, samoniklo na območju Mediterana. V zadjem času je bila različica G. coronaria var. discolor dvignjena na rang vrste kot vrsta G. discolor(d’Urv.) Canona osnovi morfoloških last-nosti, po katerih se razlikuje od vrste G. coronaria var. coronaria(=G. coronaria). Za preučitev genetske osnove te raznolikosti so bili uporabljeni AFLP markerji za analizo genotipov vrst G. di-scolor in G. coronaria vzorčenih na različnih območjih Medite-rana (Italija, Španija in Portugalska). Rezultati so pokazali, da je bilo med 1347 fragmenti, identificiranih s kombinacijami petih primerjev 99,55 % polimorfnih. Genetska razdalja in vrednosti Shannonovega indeksa nakazujejo, da sta vrsti genetsko ločeni, a so potrebne nadaljne raziskave za potrditev te hipoteze.
Description
Referencias bibliográficas:
• Ata, A. E. T. M., Abd El-Twab, M. H., Helmey, R. K., & Dahy, H. (2017). Phylogenetic relationships among Egyptian species of Anthemideae (Asteraceae) using ITS markers. Chromosome Botany, 12(1), 1-6. https://doi.org/10.3199/iscb.12.1
• Bartolucci, F., Peruzzi, L., Galasso, G., Albano, A., Alessandrini, A. N. M. G., Ardenghi, N. M. G., Astuti, G., Bacchetta, G., Ballelli, S., Banfi, E., Barberis, G., Bernardo, L., Bouvet, D., Bovio, M., Cecchi, L., Di Pietro, L., Domina, G., Fascetti, S., Fenu, G., Festi, G., Foggi, B., Gallo, L., Gottschlich, G., Gubellini, L., Iamonico, D., Iberite, M., Jimenez-Mejias, P., Lattanzi, E., Marchetti, D., Martinetto, E., Masin, R.R., Medagli, P., Passalacqua, N.G., Peccenini, S., Pennesi, R., Pierini, B., Poldini, L., Prosser, F., Raimondo, F.M., Roma-Marzio, F., Rosati, L., Santangelo, A., Scoppola, A., Scortegagna, S., Selvaggi, A., Selvi, F., Soldano, A., Stinca, A., Wagensommer, R.P., Wilhalm, T. & Conti, F. (2018). An updated checklist of the vascular flora native to Italy. Plant Biosystems, 152(2), 179-303. https://doi.org/10.1 080/11263504.2017.1419996
• Bhat, M. N., Singh, B., Surmal, O., Singh, B., Shivgotra, V., & Musarella, C. M. (2021). Ethnobotany of the Himalayas: safeguarding medical practices and traditional uses of Kashmir regions. Biology, 10(9), 851. https://doi.org/10.3390/biology10090851
• Cano, E., Cano-Ortiz, A., Musarella, C. M., Pinar Fuentes, J. C., Quinto Canas, R., Spampinato, G., & Pinto Gomes, C. J. (2020). Endemic and rare species of Asteraceae from the Southern Iberian Peninsula: Ecology, distribution and syntaxonomy. Asteraceae: Characteristics, Distribution and Ecology; Nova Science Publishers, Inc.: Hauppauge, NY, USA, 147-175.
• Cano, E., Musarella, C. M., Cano-Ortiz, A., Fuentes, J. C. P., Spampinato, G., & Gomes, C. J. P. (2017). Morphometric analysis and bioclimatic distribution of Glebionis coronaria s.l. (Asteraceae) in the Mediterranean area. PhytoKeys, (81), 103. https://doi.org/10.3897/phytokeys.81.11995
• Carputo, D., Alioto, D., Aversano, R., Garramone, R., Miraglia, V., Villano, C., & Frusciante, L. (2013). Genetic diversity among potato species as revealed by phenotypic resistances and SSR markers. Plant Genetic Resources, 11(2), 131-139. https://doi.org/10.1017/S1479262112000500
• Cueto, M., Melendo, M., Gimenez, E., Fuentes, J., Lopez-Carrique, E., & Blanca, G. (2018). First updated checklist of the vascular flora of Andalusia (S of Spain), one of the main biodiversity centres in the Mediterranean Basin. Phytotaxa, 339(1), 1-95. https://doi.org/10.11646/phytotaxa.339.1.1
• D'Urville, J. S. C. D (1822) Chrysanthemum coronarium L. var. discolor d'Urv. Memoires de la. Société Linneenne de Paris, 1, 368. https://doi.org/10.15468/39omei
• da Silva, J. A. T., Yonekura, L., Kaganda, J., Mookdasanit, J., Nhut, D. T., Afach, G. (2005) Important secondary metabolites and essential oils of species within the Anthemidae (Asteraceae). Journal of Herbs, Spices & Medicinial Plants, 11, 1-46. https://doi.org/10.1300/J044v11n01_01
• Hassler, M. (2021). Asteraceae. World Plants: Synonymic Checklists of the Vascular Plants of the World In: Roskovh, Y., Abucay, L., Orrell, T., Nicolson, D., Bailly, N., Kirk, P., Bourgoin, T., DeWalt, R.E., Decock, W., De Wever, A., Nieukerken, E. van, Zarucchi, J. & Penev, L., eds. 2021.
• Khareba, O., Kuzmin, O., Khareba, O., Marynchenko, V., Karputina, M., & Koretska, I. (2021). Antioxidant characteristics of non-traditional spicy-aromatic vegetable raw materials for restaurant technology. Ukrainian Food Journal, 10(2), 301-320. https://doi.org/10.24263/2304-974X-2021-10-2-8
• Mezhoud, S., Derbre, S., Ameddah, S., Mekkiou, R., Boumaza, O., Seghiri, R., Benayache, S., & Benayache, F. (2012). Antioxidant activity and chemical constituents of Warionia saharae Benth. & Coss.(Compositae) from Algeria. International Journal of Medicinal and Aromatic Plants, 2(3), 509-513.
• Nei, M., & Li, W. H. (1979). Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences, 76(10), 5269-5273. https://doi.org/10.1073/pnas.76.10.5269
• Nguyen, H. T. T., Choi, K. S., & Park, S. (2013). Genetic diversity and differentiation of a narrowly distributed and endemic species, Aster spathulifolius Maxim. (Asteraceae), revealed with inter simple sequence repeat markers. Journal of the Korean Society for Applied Biological Chemistry, 56(3), 255-262. https://doi.org/10.1007/s13765-012-3260-5
• Nkuimi Wandjou, J. G., Quassinti, L., Gudžinskas, Z., Nagy, D. U., Cianfaglione, K., Bramucci, M., & Maggi, F. (2020). Chemical composition and antiproliferative effect of essential oils of four Solidago species (S. canadensis, S. gigantea, S. virgaurea and S.× niederederi). Chemistry & Biodiversity, 17(11), e2000685. https://doi.org/10.1002/cbdv.202000685
• Pace, L., Pellegrini, M., Pannunzio, G., & Pirone, G. (2020). First report of fasciation symptom in Artemisia eriantha (Asteraceae), a typical orophyte of high-altitude cliffs, in Central Apennines (Italy). Plant Sociology, 57, 23-28. https:// doi.org/10.3897/pls2020571/03
• Peakall, R. O. D., & Smouse, P. E. (2006). GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes, 6(1), 288-295. https:// doi.org/10.1111/j.1471-8286.2005.01155.x
• Portal to the Flora of Italy. Available at https://www.actaplantarum.org/flora/flora_info.php?id=11637 [Accessed: 11/04/2022]"
• POWO. Plants of the World Online. Facilitated by the Royal Botanic Gardens, Kew. Available at https://powo.science.kew.org/taxon/urn:lsid:ipni.org:names:9057-1#children [Accessed: 11/02/2022.
• Rivera Jimenez, H. J., Alvarez Soto, A., Palacio MejIa, J. D., Barrios Leal, D. Y., & Lopez Alvarez, D. (2011). Intra and interspecific genetic diversity of yam (Dioscorea spp.) from the Colombian Caribbean region by AFLP markers.
• Rivera Jimenez, H., Vallejo Cabrera, F. A., & Suarez Padron, I. (2008). Molecular characterization of colombian wild cane accesions with AFLP. Acta Agronómica, 57(4), 227-231.
• Saoud, D. H., Jelassi, A., Hlila, M. B., Goudjil, M. B., Ladjel, S., & Jannet, H. B. (2019). Biological activities of extracts and metabolites isolated from Anvillea radiata Coss. & Dur. (Asteraceae). South African Journal of Botany, 121, 386-393. https://doi.org/10.1016/j.sajb.2018.10.033
• Sicari, V., Loizzo, M. R., Sanches Silva, A., Romeo, R., Spampinato, G., Tundis, R., Leporini, M.; & Musarella, C. M. (2020). The effect of blanching on phytochemical content and bioactivity of Hypochaeris and Hyoseris species (Asteraceae), vegetables traditionally used in Southern Italy. Foods, 10(1), 32. https://doi.org/10.3390/foods10010032
• Singh, B., Singh, B., Kishor, A., Singh, S., Bhat, M. N., Surmal, O., & Musarella, C. M. (2020). Exploring plant-based ethnomedicine and quantitative ethnopharmacology: Medicinal plants utilized by the population of Jasrota Hill in Western Himalaya. Sustainability, 12(18), 7526. https://doi.org/10.3390/su12187526
• Stinca A. (2022). Typification of the Lacaita's name Senecio stabianus (Asteraceae), basionym of the Italian endemic Senecio ovatus subsp. stabianus. Phytotaxa, 570(3), 295-300. https://doi.org/10.11646/phytotaxa.570.3.5
• Tengel, C., Schusler, P., Setzke, E., Balles, J., & Sprenger- Haussels, M. (2001). PCR-based detection of genetically modified soybean and maize in raw and highly processed foodstuffs. BioTechniques, 31(2), 426-429. https://doi.org/10.2144/01312pf01
• Thiers, B. Index Herbariorum: A Global Directory of Public Herbaria. New York Botanical Garden's Virtual Herbarium. Available online: http://sweetgum.nybg.org/ih/ (accessed on 20 February 2023).
• Villano, C., Carputo, D., Frusciante, L., Santoro, X., & Aversano, R. (2014). Use of SSR and retrotransposon-based markers to interpret the population structure of native grapevines from southern Italy. Molecular Biotechnology, 56(11), 1011-1020. https://doi.org/10.1007/s12033-014-9780-y
• Villano, C., Aiese Cigliano, R., Esposito, S., D'Amelia, V., Iovene, M., Carputo, D., & Aversano, R. (2022). DNA-based technologies for grapevine biodiversity exploitation: State of the art and future perspectives. Agronomy, 12(2), 491. https://doi.org/10.3390/agronomy12020491
• Villano, C., Corrado, G., Basile, B., Di Serio, E., Mataffo, A., Ferrara, E., & Aversano, R. (2023). Morphological and genetic clonal diversity within the 'Greco Bianco' grapevine (Vitis vinifera L.) variety. Plants, 12(3), 515. https://doi.org/10.3390/plants12030515
• Vos, P., Hogers, R., Bleeker, M., Reijans, M., Lee, T. V. D., Hornes, M., Frijters, A., Pot, J., Peleman, J., Kuiper, M & Zabeau, M. (1995). AFLP: a new technique for DNA fingerprinting. Nucleic Acids Research, 23(21), 4407-4414. https:// doi.org/10.1093/nar/23.21.4407
• Wagensommer, R.P., Perrino, E.V., Albano, A., Medagli, P. & Passalacqua, N.G. (2016). Lectotypification of four Lacaita's names in the genus Centaurea (Asteraceae). Phytotaxa, 269, 054-058. https://doi.org/10.11646/phytotaxa.269.1.7
• Wu, W. D., Liu, W. H., Sun, M., Zhou, J. Q., Liu, W., Zhang, C. L., X. Q., Peng, Y., Huang, L. K., & Ma, X. (2019). Genetic diversity and structure of Elymus tangutorum accessions from western China as unraveled by AFLP markers. Hereditas, 156(1), 1-13. https://doi.org/10.1186/s41065-019-0082-z
• Yildirim, E., Servi, H., Keskin, B. E., & Yilancioglu, K. (2018). Chemical composition and antimicrobial activity of Glebionis coronaria (L.) Cass. ex Spach essential oil. Facta Universitatis. Series Physics, Chemistry and Technology, 16(1), 145.
• .