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Enhancement of Cryo-EM maps by a multiscale tubular filter

dc.contributor.authorVargas Balbuena, Javier
dc.contributor.authorGómez Pedrero, José Antonio
dc.contributor.authorQuiroga Mellado, Juan Antonio
dc.contributor.authorAlonso Fernández, José
dc.date.accessioned2023-06-22T10:40:44Z
dc.date.available2023-06-22T10:40:44Z
dc.date.issued2022-01-31
dc.description© 2022 Optica Publishing Group. Funding. Ministerio de Ciencia e Innovación (PID2019-108850RA-I00).
dc.description.abstractWe present an approach to enhance cryo-electron microscopy (cryo-EM) postprocessed maps based on a multiscale tubular filter. The method determines a tubularness measure locally by the analysis of the eigenvalues of the Hessian matrix. This information is used to enhance elongated local structures and to attenuate blob-like and plate-like structures. The approach, thus, introduces a priori information in the reconstructions to improve their interpretability and analysis at high-resolution. The proposed method has been tested with simulated and real cryo-EM maps including recent reconstructions of the SARS-CoV-2. Our results show that our methods can improve obtained reconstructions.
dc.description.departmentDepto. de Óptica
dc.description.facultyFac. de Ciencias Físicas
dc.description.refereedTRUE
dc.description.sponsorshipMinisterio de Ciencia e Innovacion (MICINN)
dc.description.statuspub
dc.eprint.idhttps://eprints.ucm.es/id/eprint/70705
dc.identifier.doi10.1364/OE.444675
dc.identifier.issn1094-4087
dc.identifier.officialurlhttp://dx.doi.org/10.1364/OE.444675
dc.identifier.relatedurlhttps://opg.optica.org
dc.identifier.urihttps://hdl.handle.net/20.500.14352/71328
dc.issue.number3
dc.journal.titleOptics express
dc.language.isoeng
dc.page.final4527
dc.page.initial4515
dc.publisherThe Optical Society of America
dc.relation.projectIDPID2019-108850RA-I00
dc.rightsAtribución 3.0 España
dc.rights.accessRightsopen access
dc.rights.urihttps://creativecommons.org/licenses/by/3.0/es/
dc.subject.cdu535
dc.subject.keywordResolution
dc.subject.ucmÓptica (Física)
dc.subject.unesco2209.19 Óptica Física
dc.titleEnhancement of Cryo-EM maps by a multiscale tubular filter
dc.typejournal article
dc.volume.number30
dspace.entity.typePublication
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relation.isAuthorOfPublication.latestForDiscovery6ccb1e60-8b61-4b23-8a0a-09af30f7b795

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