Viability Conditions for a Compartmentalized
Protometabolic System: A Semi-Empirical Approach
dc.contributor.author | Piedrafita Fernández, Gabriel | |
dc.contributor.author | Ruiz-Mirazo, Kepa | |
dc.contributor.author | Monnard, Pierre Alain | |
dc.contributor.author | Cornish-Bowden, Athel J. | |
dc.contributor.author | Montero, Francisco J. | |
dc.date.accessioned | 2023-06-20T03:49:08Z | |
dc.date.available | 2023-06-20T03:49:08Z | |
dc.date.issued | 2012 | |
dc.description.abstract | In this work we attempt to find out the extent to which realistic prebiotic compartments, such as fatty acid vesicles, would constrain the chemical network dynamics that could have sustained a minimal form of metabolism. We combine experimental and simulation results to establish the conditions under which a reaction network with a catalytically closed organization (more specifically, an (M,R)-system) would overcome the potential problem of self-suffocation that arises from the limited accessibility of nutrients to its internal reaction domain. The elationship between the permeability of the membrane, the lifetime of the key catalysts and their efficiency (reaction rate enhancement) turns out to be critical. In particular, we show how permeability values constrain the characteristic time scale of the bounded protometabolic processes. From this concrete and illustrative example we finally extend the discussion to a wider evolutionary context. | |
dc.description.department | Depto. de Bioquímica y Biología Molecular | |
dc.description.faculty | Fac. de Ciencias Químicas | |
dc.description.refereed | TRUE | |
dc.description.sponsorship | Ministerio de Economía y Competitividad | |
dc.description.sponsorship | Ministerio de Economía y Competitividad | |
dc.description.status | pub | |
dc.eprint.id | https://eprints.ucm.es/id/eprint/29359 | |
dc.identifier.doi | e39480 | |
dc.identifier.issn | 1932-6203 | |
dc.identifier.officialurl | http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0039480 | |
dc.identifier.uri | https://hdl.handle.net/20.500.14352/44496 | |
dc.issue.number | 6 | |
dc.journal.title | Plos One | |
dc.language.iso | eng | |
dc.publisher | Public Library of Science | |
dc.relation.projectID | BFU2009-12895-C02-02 | |
dc.relation.projectID | FFI2011-25665 | |
dc.rights.accessRights | open access | |
dc.subject.cdu | 577.2 | |
dc.subject.cdu | 57:51 | |
dc.subject.keyword | EMTREE drug terms: glycerol oleate | |
dc.subject.keyword | lauric acid | |
dc.subject.keyword | oleic acid | |
dc.subject.keyword | prebiotic agent EMTREE medical terms: article | |
dc.subject.keyword | catalyst | |
dc.subject.keyword | enzyme kinetics | |
dc.subject.keyword | fatty acid analysis | |
dc.subject.keyword | lipid vesicle | |
dc.subject.keyword | membrane permeability | |
dc.subject.keyword | metabolism | |
dc.subject.keyword | polymerization | |
dc.subject.keyword | protein lipid interaction | |
dc.subject.keyword | protometabolism | |
dc.subject.keyword | secretory vesicle | |
dc.subject.keyword | steady state | |
dc.subject.keyword | thermodynamics MeSH: Biological Evolution | |
dc.subject.keyword | Cell Membrane | |
dc.subject.keyword | Computer Simulation | |
dc.subject.keyword | Models | |
dc.subject.keyword | Biological | |
dc.subject.keyword | Permeability | |
dc.subject.ucm | Biología | |
dc.subject.ucm | Biología molecular (Biología) | |
dc.subject.ucm | Biomatemáticas | |
dc.subject.unesco | 24 Ciencias de la Vida | |
dc.subject.unesco | 2415 Biología Molecular | |
dc.subject.unesco | 2404 Biomatemáticas | |
dc.title | Viability Conditions for a Compartmentalized Protometabolic System: A Semi-Empirical Approach | |
dc.type | journal article | |
dc.volume.number | 7 | |
dspace.entity.type | Publication | |
relation.isAuthorOfPublication | 0ae6fdc5-d55e-4c98-9dff-0fd5cec79d1f | |
relation.isAuthorOfPublication.latestForDiscovery | 0ae6fdc5-d55e-4c98-9dff-0fd5cec79d1f |
Download
Original bundle
1 - 1 of 1
Loading...
- Name:
- vibility conditions (PloS ONE 2012).pdf
- Size:
- 1.34 MB
- Format:
- Adobe Portable Document Format